Run GeneMark-ES using pretrained models
Project description
pygmes is a wraper for GeneMark-ES
This project aims at making GeneMark-ES more usable. By default GeneMark-ES has some problems with fragmented and incomplete genomes.
For metagenomic analysis this is an issue, thus I developed pygmes.
Status
Currently this project is very much WIP, so do expect problems and incomplete documentation.
It is just on pip already as it is a suggested package for EukCC (https://github.com/Finn-Lab/EukCC/)
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