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Convert Snapgene *.dna files dict/json/biopython.

Project description

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SnapGene Reader is a Python library to parse Snapgene *.dna files into dictionaries or Biopython SeqRecords:

from snapgene_reader import snapgene_file_to_dict, snapgene_file_to_seqrecord

file_path = './snap_gene_file.dna'
dictionary = snapgene_file_to_dict(filepath)
seqrecord = snapgene_file_to_seqrecord(filepath)

Installation

Install with PIP:

pip install snapgene_reader

Test with Pytest:

python -m pytest
# or simply "pytest"

Licence = MIT

SnapGene Reader is an open-source software originally written by Isaac Luo at the Cai Lab. This fork is released on Github under the MIT licence. Everyone is welcome to contribute!

Project details


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