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Convert Snapgene *.dna files dict/json/biopython.

Project description

Travis CI build status

SnapGene Reader is a Python library to parse Snapgene *.dna files into dictionnaries or Biopython SeqRecords:

from snapgene_reader import snapgene_file_to_dict, snapgene_file_to_seqrecord

file_path = './snap_gene_file.dna'
dictionnary = snapgene_file_to_dict(filepath)
seqrecord = snapgene_file_to_seqrecord(filepath)

Installation

Install with PIP:

pip install snapgene_reader

Test with Pytest:

python -m pytest
(or simply "pytest")

Licence = MIT

SnapGene Reader is an open-source software originally written by Isaac Luo at the Cai Lab. This fork is released on Github under the MIT licence (Copyright Isaac Luo and Cai Lab) and maintained by the Edinburgh Genome Foundry. Everyone is welcome to contribute.

Project details


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