11 projects
napari-phasors
A plugin for performing phasor analysis of fluorescence microscopy data
napari-clusters-plotter
A plugin to use with napari for clustering objects according to their properties
biaplotter
A base napari plotter widget for interactive plotting
napari-flim-phasor-plotter
A plugin that performs phasor plot from TCSPC FLIM data.
napari-crop
Crop regions in napari manually
napari-signal-classifier
A napari plugin that classifies annotated signals stored in a table in the .features of a Labels layer using scikit-learn RandomForest classifier.
napari-signal-selector
An interactive signal selector for napari, based on matplotlib.
nap-plot-tools
A NAPari PLOTter TOOLbar and tools for additional functionalities.
napari-metroid
This napari plugin creates several regions of interest of similar area over cells in a fluorescence video (2D+time). It then gets ROIs means over time and performs signal denoising: fixes photobleaching and separates signal from noise by means of blind source separation (with or without wavelet filtering).
flood-napari
A simple plugin to flood 8-bit 2D images by means of a big blue label
biapol-utilities
Collection of bio-image analysis functions of the biapol group @ TU Dresden.
