Stars pypi

bionty: Manage biological ontologies

  • Access >20 public ontologies (Gene, Protein, CellType, …) through a single API, served from S3 with high availability and low latency.
  • Create records from entries in public ontologies using .from_source().
  • Access full underlying public ontologies via .public() to search & bulk-create records.
  • Create in-house ontologies by extending public ontologies using hierarchical relationships among records (.parents).
  • Use .synonyms and .abbr to manage synonyms.
  • Safeguards against typos & duplications.
  • Manage multiple ontology versions via bionty.Source.

Read the docs.

Project links

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  • Released:
Latest release

3 maintainers

PyPI data
Data sourced directly from PyPI's database.
Avatar for Koncopd from gravatar.com Koncopd Avatar for lamindev from gravatar.com lamindev Avatar for sunnyosun from gravatar.com sunnyosun

Credits

Author: Lamin Labs

Requires

Python >=3.10

Provides Extra

dev

Report project as malware

Metadata

Project links

Key dates

PyPI data
Data sourced directly from PyPI's database.
  • Released:
Latest release

3 maintainers

PyPI data
Data sourced directly from PyPI's database.
Avatar for Koncopd from gravatar.com Koncopd Avatar for lamindev from gravatar.com lamindev Avatar for sunnyosun from gravatar.com sunnyosun

Credits

Author: Lamin Labs

Requires

Python >=3.10

Provides Extra

dev

Report project as malware

Release files for bionty 2.5.2

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for bionty 2.5.2
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bionty-2.5.2.tar.gz 99.0 kB Details

Built distribution (wheel)

Table of built distributions (wheels) for bionty 2.5.2
File Interpreter ABI Platform
bionty-2.5.2-py3-none-any.whl 87.2 kB Python 3 none any Details

Total release size: 186.2 kB

Release files / bionty-2.5.2.tar.gz

Download URL bionty-2.5.2.tar.gz
Size 99.0 kB
Tags Source
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Release files / bionty-2.5.2-py3-none-any.whl

Download URL bionty-2.5.2-py3-none-any.whl
Size 87.2 kB
Tags Python 3
SHA-256 checksum
How to use checksums 		cff359c1ef55322919bf42381de3b61132ac007d0a88b6906a885c7b28980c84
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