Stars pypi

bionty: Manage biological ontologies

  • Access >20 public ontologies (Gene, Protein, CellType, …) through a single API, served from S3 with high availability and low latency.
  • Create records from entries in public ontologies using .from_source().
  • Access full underlying public ontologies via .public() to search & bulk-create records.
  • Create in-house ontologies by extending public ontologies using hierarchical relationships among records (.parents).
  • Use .synonyms and .abbr to manage synonyms.
  • Safeguards against typos & duplications.
  • Manage multiple ontology versions via bionty.Source.

Read the docs.

Project links

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PyPI data
Data sourced directly from PyPI's database.
  • Released:
Newer release available (2.5.2)

3 maintainers

PyPI data
Data sourced directly from PyPI's database.
Avatar for Koncopd from gravatar.com Koncopd Avatar for lamindev from gravatar.com lamindev Avatar for sunnyosun from gravatar.com sunnyosun

Credits

Author: Lamin Labs

Requires

Python >=3.10

Provides Extra

dev

Report project as malware

Metadata

Project links

Key dates

PyPI data
Data sourced directly from PyPI's database.
  • Released:
Newer release available (2.5.2)

3 maintainers

PyPI data
Data sourced directly from PyPI's database.
Avatar for Koncopd from gravatar.com Koncopd Avatar for lamindev from gravatar.com lamindev Avatar for sunnyosun from gravatar.com sunnyosun

Credits

Author: Lamin Labs

Requires

Python >=3.10

Provides Extra

dev

Report project as malware

Release files for bionty 2.5.1

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for bionty 2.5.1
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bionty-2.5.1.tar.gz 96.6 kB Details

Built distribution (wheel)

Table of built distributions (wheels) for bionty 2.5.1
File Interpreter ABI Platform
bionty-2.5.1-py3-none-any.whl 86.1 kB Python 3 none any Details

Total release size: 182.7 kB

Release files / bionty-2.5.1.tar.gz

Download URL bionty-2.5.1.tar.gz
Size 96.6 kB
Tags Source
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Release files / bionty-2.5.1-py3-none-any.whl

Download URL bionty-2.5.1-py3-none-any.whl
Size 86.1 kB
Tags Python 3
SHA-256 checksum
How to use checksums 		9b0d6e6daa7abe4746358b958c56598874f625b18b4ca6dbabdeb0185df8f061
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