Skip to main content

Ontology utilities at targetvalidation.org

Project description

PyPI version

Build Status

codecov

Python package with a set of utilities to:

  • download latest version of specific ontologies (tested on EFO, ECO, HP, MP)
  • extract information from ontology OBO and OWL file format
  • query this information from memory
  • map ontology identifiers to other ontology identifiers
  • map ontology labels to relevant ontology identifiers

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

opentargets-ontologyutils-1.2.1.tar.gz (9.3 kB view details)

Uploaded Source

Built Distributions

opentargets_ontologyutils-1.2.1-py3-none-any.whl (15.4 kB view details)

Uploaded Python 3

opentargets_ontologyutils-1.2.1-py2-none-any.whl (15.4 kB view details)

Uploaded Python 2

File details

Details for the file opentargets-ontologyutils-1.2.1.tar.gz.

File metadata

  • Download URL: opentargets-ontologyutils-1.2.1.tar.gz
  • Upload date:
  • Size: 9.3 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.13.0 pkginfo/1.5.0.1 requests/2.21.0 setuptools/40.8.0 requests-toolbelt/0.9.1 tqdm/4.31.1 CPython/2.7.14

File hashes

Hashes for opentargets-ontologyutils-1.2.1.tar.gz
Algorithm Hash digest
SHA256 600f45c65c692c41f1adc976e24a35aa15bee5402ab9933f9a8a642a7ddaf342
MD5 aa4428ccef55c665102a414fb43a6314
BLAKE2b-256 de06cc83410fb95ccfa9a005ee790f24415f26312ea1546d0ba913737a2e9fc9

See more details on using hashes here.

File details

Details for the file opentargets_ontologyutils-1.2.1-py3-none-any.whl.

File metadata

  • Download URL: opentargets_ontologyutils-1.2.1-py3-none-any.whl
  • Upload date:
  • Size: 15.4 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.13.0 pkginfo/1.5.0.1 requests/2.21.0 setuptools/40.8.0 requests-toolbelt/0.9.1 tqdm/4.31.1 CPython/3.6.3

File hashes

Hashes for opentargets_ontologyutils-1.2.1-py3-none-any.whl
Algorithm Hash digest
SHA256 e134d8b28b16a0f34e33ad56cc69a25294b43b25e3fafc7b5f81d546f04378b4
MD5 837f1b11d76c17f2213a60d58e1d5c52
BLAKE2b-256 3cfb4cb2ed0e5a3b699c5ef96c23da6c743de2f118bf57ae8ad4440616d1d6da

See more details on using hashes here.

File details

Details for the file opentargets_ontologyutils-1.2.1-py2-none-any.whl.

File metadata

  • Download URL: opentargets_ontologyutils-1.2.1-py2-none-any.whl
  • Upload date:
  • Size: 15.4 kB
  • Tags: Python 2
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.13.0 pkginfo/1.5.0.1 requests/2.21.0 setuptools/40.8.0 requests-toolbelt/0.9.1 tqdm/4.31.1 CPython/2.7.14

File hashes

Hashes for opentargets_ontologyutils-1.2.1-py2-none-any.whl
Algorithm Hash digest
SHA256 ae5e2c36adf309992500a2d1bccf7279a8da487a217da837dc6c1e200ab97ebc
MD5 1590dca5280a01112dd64c366b2534a3
BLAKE2b-256 25271603942960c57d08c6a0c7c14d6208f2d1dbcdeda226244f7938332573d0

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page