pipemake
pipemake is a lightweight, flexible, and easy-to-use tool for creating and managing Snakemake pipelines. It was designed with three primary goals:
Offer a collection of curated, customizable genomic analysis pipelines for researchers seeking to rapidly integrate Snakemake-based workflows into their research.
Optimize computational efficiency and reproducibility by fully operating in the Snakemake ecosystem.
Streamline development by creating a flexible platform with swappable pipelines that easily reuse previously written Snakemake code.
Getting pipemake
mamba
mamba create -c conda-forge -c bioconda -c kocherlab -n pipemake pipemakeIssues
Check the docs.
Search the issues on GitHub or open a new one.
License
Pipemake is licensed under the MIT license. See the LICENSE file for details.
1 maintainer
Metadata
1 maintainer
Release files for pipemake 1.5.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| pipemake-1.5.0.tar.gz | 32.6 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| pipemake-1.5.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 61.5 kB
Release files / pipemake-1.5.0.tar.gz
| Download URL | pipemake-1.5.0.tar.gz |
|---|---|
| Size | 32.6 kB |
| Tags | Source |
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SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
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Release files / pipemake-1.5.0-py3-none-any.whl
| Download URL | pipemake-1.5.0-py3-none-any.whl |
|---|---|
| Size | 28.9 kB |
| Tags | Python 3 |
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SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.2.0 CPython/3.9.25
|
