No project description provided

Navigation

Verified details

These details have been verified by PyPI
Maintainers
Avatar for FlyGuy88 from gravatar.com FlyGuy88 Avatar for mvalentine65 from gravatar.com mvalentine65

Unverified details

These details have not been verified by PyPI
Meta
  • License: Apache-2.0
  • Author: Michael Valentine
  • Tags Python wrapper , high-performance
  • Requires: Python >=3.8
Classifiers
Report project as malware

Project description

sapphyre-tools

Bioinformatics tooling for sequence comparison, distance scoring, and reproducibility.

This project includes a collection of command-line tools and libraries focused on DNA and protein sequence analysis. Core features include scoring-matrix-based phylogenetic distance calculations and SIMD-accelerated Hamming distance utilities.

Installation

pip install sapphyre-tools

Features

  • Scoring matrix support (e.g., BLOSUM62)
  • SIMD-accelerated sequence comparison
  • Tools for reproducible bioinformatics pipelines
  • Built in Rust and Python

Status

Actively maintained and used in research pipelines. Packaging and documentation improvements are in progress.

License

Apache-2.0

Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for FlyGuy88 from gravatar.com FlyGuy88 Avatar for mvalentine65 from gravatar.com mvalentine65

Unverified details

These details have not been verified by PyPI
Meta
  • License: Apache-2.0
  • Author: Michael Valentine
  • Tags Python wrapper , high-performance
  • Requires: Python >=3.8
Classifiers

Release history Release notifications | RSS feed

0.11.9

0.11.8

0.11.7

0.11.6

0.11.5

0.11.4

0.11.3

0.11.2

0.10.20

0.10.19

0.10.18

This version

0.10.17

0.10.16

0.10.15

0.10.14

0.10.13

0.10.12

0.10.11

0.10.10

0.10.9

0.10.8

0.10.7

0.10.6

0.10.5

0.10.4

0.10.3

0.10.2

0.10.1

0.10.0

0.9.9

0.9.8

0.9.7

0.9.6

0.9.5

0.9.4

0.9.3

0.9.2

0.9.1

0.9.0

0.8.3

0.8.2

0.8.1

0.8.0

0.7.4

0.7.3

0.7.2

0.7.1

0.7.0

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distributions

No source distribution files available for this release.See tutorial on generating distribution archives.

Built Distributions

If you're not sure about the file name format, learn more about wheel file names.

sapphyre_tools-0.10.17-cp313-cp313-manylinux_2_28_x86_64.whl (4.2 MB view details)

Uploaded CPython 3.13manylinux: glibc 2.28+ x86-64

sapphyre_tools-0.10.17-cp312-cp312-manylinux_2_28_x86_64.whl (4.2 MB view details)

Uploaded CPython 3.12manylinux: glibc 2.28+ x86-64

sapphyre_tools-0.10.17-cp311-cp311-manylinux_2_28_x86_64.whl (4.2 MB view details)

Uploaded CPython 3.11manylinux: glibc 2.28+ x86-64

sapphyre_tools-0.10.17-cp310-cp310-manylinux_2_28_x86_64.whl (4.2 MB view details)

Uploaded CPython 3.10manylinux: glibc 2.28+ x86-64

sapphyre_tools-0.10.17-cp39-cp39-manylinux_2_28_x86_64.whl (4.2 MB view details)

Uploaded CPython 3.9manylinux: glibc 2.28+ x86-64

sapphyre_tools-0.10.17-cp38-cp38-manylinux_2_28_x86_64.whl (4.2 MB view details)

Uploaded CPython 3.8manylinux: glibc 2.28+ x86-64

File details

Details for the file sapphyre_tools-0.10.17-cp313-cp313-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.17-cp313-cp313-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 e7393d59e0d7686eb4870f12a1e42345c64f064cb0163ffb46aeb15af380ede1
MD5 bf64eacedd8b3916c5a66614ae8bee1b
BLAKE2b-256 aecc2a006ee9de129324035a7c7b1a998fd64fd8cefd6993c7a5e6a92d835fd0

See more details on using hashes here.

File details

Details for the file sapphyre_tools-0.10.17-cp312-cp312-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.17-cp312-cp312-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 b3d8d196f465dba326402e31a64d4d2075424af2ddb6db421b98da2377f911c2
MD5 17f3c6cf951bb9585897cf6b25ee5b60
BLAKE2b-256 b854ec8ab44c80342ce6941b6584c7915619da8f7c56b8220b0ae4bbb6f39f1b

See more details on using hashes here.

File details

Details for the file sapphyre_tools-0.10.17-cp311-cp311-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.17-cp311-cp311-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 40ecf9afcd2b3f97f4b61e0a9091dcc7ca3c74695c1b6d207c4a3e0d41c709a7
MD5 235fd4e5ecd2b98191e96efb65a54fdf
BLAKE2b-256 aae4a096479c5390f696c7c34d6ce2d3df9ab8a2d07ce764abdbf612f52860e5

See more details on using hashes here.

File details

Details for the file sapphyre_tools-0.10.17-cp310-cp310-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.17-cp310-cp310-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 a02752a8aa0215241424b612191bbe6f6c2d214beee845162c155f9b7bb0ff58
MD5 cd75d7ff31e8d9ecbdd78709b876595d
BLAKE2b-256 6682f6c8bd5a94208ac24c6af073e57182b1338bd830dd923faf05a5d5518c7d

See more details on using hashes here.

File details

Details for the file sapphyre_tools-0.10.17-cp39-cp39-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.17-cp39-cp39-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 9c5d48b133afd20d82341ce27c9e7e87d2a78a9ff624412f558efa776fb56403
MD5 7f1558ef2dec95e4a82fe1323b7c91f8
BLAKE2b-256 545f02ed64f9450a1c5f8b519ef9945da577924497e96c51d239412c57c8ee30

See more details on using hashes here.

File details

Details for the file sapphyre_tools-0.10.17-cp38-cp38-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.17-cp38-cp38-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 8e6d78ac50425621d5c0f481f34af66b9a65c3ac97463ca73231f6b8c7df81a6
MD5 ae99d0465e7f9882ce64606d4e110ccc
BLAKE2b-256 eef1b82b8ace278e0951b77da587ff52e483b2020f5878062d863f5f353339a0

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page