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  • License: Apache-2.0
  • Author: Michael Valentine
  • Tags Python wrapper , high-performance
  • Requires: Python >=3.8
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Project description

sapphyre-tools

Bioinformatics tooling for sequence comparison, distance scoring, and reproducibility.

This project includes a collection of command-line tools and libraries focused on DNA and protein sequence analysis. Core features include scoring-matrix-based phylogenetic distance calculations and SIMD-accelerated Hamming distance utilities.

Installation

pip install sapphyre-tools

Features

  • Scoring matrix support (e.g., BLOSUM62)
  • SIMD-accelerated sequence comparison
  • Tools for reproducible bioinformatics pipelines
  • Built in Rust and Python

Status

Actively maintained and used in research pipelines. Packaging and documentation improvements are in progress.

License

Apache-2.0

Project details

Verified details

These details have been verified by PyPI
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Avatar for FlyGuy88 from gravatar.com FlyGuy88 Avatar for mvalentine65 from gravatar.com mvalentine65

Unverified details

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Meta
  • License: Apache-2.0
  • Author: Michael Valentine
  • Tags Python wrapper , high-performance
  • Requires: Python >=3.8
Classifiers

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0.11.14

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