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  • License: Apache-2.0
  • Author: Michael Valentine
  • Tags Python wrapper , high-performance
  • Requires: Python >=3.8
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Project description

sapphyre-tools

Bioinformatics tooling for sequence comparison, distance scoring, and reproducibility.

This project includes a collection of command-line tools and libraries focused on DNA and protein sequence analysis. Core features include scoring-matrix-based phylogenetic distance calculations and SIMD-accelerated Hamming distance utilities.

Installation

pip install sapphyre-tools

Features

  • Scoring matrix support (e.g., BLOSUM62)
  • SIMD-accelerated sequence comparison
  • Tools for reproducible bioinformatics pipelines
  • Built in Rust and Python

Status

Actively maintained and used in research pipelines. Packaging and documentation improvements are in progress.

License

Apache-2.0

Project details

Verified details

These details have been verified by PyPI
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Avatar for FlyGuy88 from gravatar.com FlyGuy88 Avatar for mvalentine65 from gravatar.com mvalentine65

Unverified details

These details have not been verified by PyPI
Meta
  • License: Apache-2.0
  • Author: Michael Valentine
  • Tags Python wrapper , high-performance
  • Requires: Python >=3.8
Classifiers

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0.11.9

0.11.8

0.11.7

0.11.6

0.11.5

0.11.4

0.11.3

0.11.2

0.10.20

0.10.19

0.10.18

0.10.17

0.10.16

0.10.15

0.10.14

0.10.13

0.10.12

0.10.11

0.10.10

0.10.9

0.10.8

This version

0.10.7

0.10.6

0.10.5

0.10.4

0.10.3

0.10.2

0.10.1

0.10.0

0.9.9

0.9.8

0.9.7

0.9.6

0.9.5

0.9.4

0.9.3

0.9.2

0.9.1

0.9.0

0.8.3

0.8.2

0.8.1

0.8.0

0.7.4

0.7.3

0.7.2

0.7.1

0.7.0

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