No project description provided

Navigation

Verified details

These details have been verified by PyPI
Maintainers
Avatar for FlyGuy88 from gravatar.com FlyGuy88 Avatar for mvalentine65 from gravatar.com mvalentine65

Unverified details

These details have not been verified by PyPI
Meta
  • License: Apache-2.0
  • Author: Michael Valentine
  • Tags Python wrapper , high-performance
  • Requires: Python >=3.8
Classifiers
Report project as malware

Project description

sapphyre-tools

Bioinformatics tooling for sequence comparison, distance scoring, and reproducibility.

This project includes a collection of command-line tools and libraries focused on DNA and protein sequence analysis. Core features include scoring-matrix-based phylogenetic distance calculations and SIMD-accelerated Hamming distance utilities.

Installation

pip install sapphyre-tools

Features

  • Scoring matrix support (e.g., BLOSUM62)
  • SIMD-accelerated sequence comparison
  • Tools for reproducible bioinformatics pipelines
  • Built in Rust and Python

Status

Actively maintained and used in research pipelines. Packaging and documentation improvements are in progress.

License

Apache-2.0

Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for FlyGuy88 from gravatar.com FlyGuy88 Avatar for mvalentine65 from gravatar.com mvalentine65

Unverified details

These details have not been verified by PyPI
Meta
  • License: Apache-2.0
  • Author: Michael Valentine
  • Tags Python wrapper , high-performance
  • Requires: Python >=3.8
Classifiers

Release history Release notifications | RSS feed

0.11.9

0.11.8

0.11.7

0.11.6

0.11.5

0.11.4

0.11.3

0.11.2

0.10.20

0.10.19

0.10.18

0.10.17

0.10.16

0.10.15

0.10.14

0.10.13

0.10.12

0.10.11

0.10.10

0.10.9

0.10.8

0.10.7

0.10.6

0.10.5

0.10.4

0.10.3

This version

0.10.2

0.10.1

0.10.0

0.9.9

0.9.8

0.9.7

0.9.6

0.9.5

0.9.4

0.9.3

0.9.2

0.9.1

0.9.0

0.8.3

0.8.2

0.8.1

0.8.0

0.7.4

0.7.3

0.7.2

0.7.1

0.7.0

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distributions

No source distribution files available for this release.See tutorial on generating distribution archives.

Built Distributions

If you're not sure about the file name format, learn more about wheel file names.

sapphyre_tools-0.10.2-cp313-cp313-manylinux_2_28_x86_64.whl (4.3 MB view details)

Uploaded CPython 3.13manylinux: glibc 2.28+ x86-64

sapphyre_tools-0.10.2-cp312-cp312-manylinux_2_28_x86_64.whl (4.3 MB view details)

Uploaded CPython 3.12manylinux: glibc 2.28+ x86-64

sapphyre_tools-0.10.2-cp311-cp311-manylinux_2_28_x86_64.whl (4.3 MB view details)

Uploaded CPython 3.11manylinux: glibc 2.28+ x86-64

sapphyre_tools-0.10.2-cp310-cp310-manylinux_2_28_x86_64.whl (4.3 MB view details)

Uploaded CPython 3.10manylinux: glibc 2.28+ x86-64

sapphyre_tools-0.10.2-cp39-cp39-manylinux_2_28_x86_64.whl (4.3 MB view details)

Uploaded CPython 3.9manylinux: glibc 2.28+ x86-64

sapphyre_tools-0.10.2-cp38-cp38-manylinux_2_28_x86_64.whl (4.3 MB view details)

Uploaded CPython 3.8manylinux: glibc 2.28+ x86-64

File details

Details for the file sapphyre_tools-0.10.2-cp313-cp313-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.2-cp313-cp313-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 e3394af93fcdb273ea45a83083ebd7a71dc5d9599c3dbd02f0ab6564c45d9bb8
MD5 1f9554364860fc99a03d135589606853
BLAKE2b-256 95c7f5c1692b90365e387b2d04a07888092f4fcdcd2dea597604031adec6b958

See more details on using hashes here.

File details

Details for the file sapphyre_tools-0.10.2-cp312-cp312-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.2-cp312-cp312-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 429c5a7a321eb50ae486cb08ec671413b46ddc01a173d7372c525a08bc266374
MD5 2db27f8062239f20fe731c2fb57d43d6
BLAKE2b-256 57c159ca97ec2464b102206779086eb00d10aff91f55a95ba9a7b5c73659416f

See more details on using hashes here.

File details

Details for the file sapphyre_tools-0.10.2-cp311-cp311-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.2-cp311-cp311-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 d92348efe5678b41e4af41a6b1638751d82e487293d9c1655ab183481aff08b7
MD5 a989e87e63c8a034702c56abde3c7e22
BLAKE2b-256 cc15e0ec361851e130b091bfe13bfa1104c1a063f618cd2429aeda0eb09e98cf

See more details on using hashes here.

File details

Details for the file sapphyre_tools-0.10.2-cp310-cp310-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.2-cp310-cp310-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 17ecaf8bbbbf87faf0bd767e70030c25db5c707b275480aaa3ccfaefb926be0f
MD5 488b94a9b4764226b4fb74400cea84fd
BLAKE2b-256 232224633c7b73b660f40ef755f47305cf0053b72832aef9d18a99dbbcdf30f8

See more details on using hashes here.

File details

Details for the file sapphyre_tools-0.10.2-cp39-cp39-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.2-cp39-cp39-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 2ddd05db936da889ed9444884e01ac6013c74a0e1b4c12a47b9f278796f6350d
MD5 fb852e8bc89939f605f4c50c0489a48a
BLAKE2b-256 ce7c884eb6a19decb76147470b20fc9571f943878eafd02eaa20e53dd559c5ef

See more details on using hashes here.

File details

Details for the file sapphyre_tools-0.10.2-cp38-cp38-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.2-cp38-cp38-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 a94fad441a1932ed9d4a23457fe4afc91e9daa847a0c57339676644d68cdf1a1
MD5 d6aea0c6b5d50e493d2b88283f3a78bc
BLAKE2b-256 464b8f8fe9b8734816885478718d043fc519f65534df00d60bb28d89cf7d99c1

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page