No project description provided

Navigation

Verified details

These details have been verified by PyPI
Maintainers
Avatar for FlyGuy88 from gravatar.com FlyGuy88 Avatar for mvalentine65 from gravatar.com mvalentine65

Unverified details

These details have not been verified by PyPI
Meta
  • License: Apache-2.0
  • Author: Michael Valentine
  • Tags Python wrapper , high-performance
  • Requires: Python >=3.8
Classifiers
Report project as malware

Project description

sapphyre-tools

Bioinformatics tooling for sequence comparison, distance scoring, and reproducibility.

This project includes a collection of command-line tools and libraries focused on DNA and protein sequence analysis. Core features include scoring-matrix-based phylogenetic distance calculations and SIMD-accelerated Hamming distance utilities.

Installation

pip install sapphyre-tools

Features

  • Scoring matrix support (e.g., BLOSUM62)
  • SIMD-accelerated sequence comparison
  • Tools for reproducible bioinformatics pipelines
  • Built in Rust and Python

Status

Actively maintained and used in research pipelines. Packaging and documentation improvements are in progress.

License

Apache-2.0

Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for FlyGuy88 from gravatar.com FlyGuy88 Avatar for mvalentine65 from gravatar.com mvalentine65

Unverified details

These details have not been verified by PyPI
Meta
  • License: Apache-2.0
  • Author: Michael Valentine
  • Tags Python wrapper , high-performance
  • Requires: Python >=3.8
Classifiers

Release history Release notifications | RSS feed

0.11.9

0.11.8

0.11.7

0.11.6

0.11.5

0.11.4

0.11.3

0.11.2

This version

0.10.20

0.10.19

0.10.18

0.10.17

0.10.16

0.10.15

0.10.14

0.10.13

0.10.12

0.10.11

0.10.10

0.10.9

0.10.8

0.10.7

0.10.6

0.10.5

0.10.4

0.10.3

0.10.2

0.10.1

0.10.0

0.9.9

0.9.8

0.9.7

0.9.6

0.9.5

0.9.4

0.9.3

0.9.2

0.9.1

0.9.0

0.8.3

0.8.2

0.8.1

0.8.0

0.7.4

0.7.3

0.7.2

0.7.1

0.7.0

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distributions

No source distribution files available for this release.See tutorial on generating distribution archives.

Built Distributions

If you're not sure about the file name format, learn more about wheel file names.

sapphyre_tools-0.10.20-cp313-cp313-manylinux_2_28_x86_64.whl (4.2 MB view details)

Uploaded CPython 3.13manylinux: glibc 2.28+ x86-64

sapphyre_tools-0.10.20-cp312-cp312-manylinux_2_28_x86_64.whl (4.2 MB view details)

Uploaded CPython 3.12manylinux: glibc 2.28+ x86-64

sapphyre_tools-0.10.20-cp311-cp311-manylinux_2_28_x86_64.whl (4.2 MB view details)

Uploaded CPython 3.11manylinux: glibc 2.28+ x86-64

sapphyre_tools-0.10.20-cp310-cp310-manylinux_2_28_x86_64.whl (4.2 MB view details)

Uploaded CPython 3.10manylinux: glibc 2.28+ x86-64

sapphyre_tools-0.10.20-cp39-cp39-manylinux_2_28_x86_64.whl (4.2 MB view details)

Uploaded CPython 3.9manylinux: glibc 2.28+ x86-64

sapphyre_tools-0.10.20-cp38-cp38-manylinux_2_28_x86_64.whl (4.2 MB view details)

Uploaded CPython 3.8manylinux: glibc 2.28+ x86-64

File details

Details for the file sapphyre_tools-0.10.20-cp313-cp313-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.20-cp313-cp313-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 9715f896a942ef1d2de7eba1d7b582ee77e793de9c62f65b23951549ecf96a97
MD5 672bd48d6fde401773351f0d6127d20b
BLAKE2b-256 8f99b76f17c98722ea8b99860f622ea790520462392cc53224b3276719b2a1f6

See more details on using hashes here.

File details

Details for the file sapphyre_tools-0.10.20-cp312-cp312-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.20-cp312-cp312-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 d49840b633c8de88694f4237cbf2d5dfd049c25114a03178f644c9ca79c2d7bb
MD5 6b3b8b67ddfa3060db4526634aea5f0e
BLAKE2b-256 01d79cc17ff03de239c26a5ddf5c59a200b772a4ff3409ce23f4ab961797c2a0

See more details on using hashes here.

File details

Details for the file sapphyre_tools-0.10.20-cp311-cp311-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.20-cp311-cp311-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 03acb8b8a439d0bc87d5e7d66e77824af665560fec48c74b000b6c8a7d4a82c4
MD5 ef6f47b1336befb99f14d3c40a7819fb
BLAKE2b-256 609691db9ed9b315e27421d9e06f4d69fde3f1466da1d1fdd2276539a1a6288e

See more details on using hashes here.

File details

Details for the file sapphyre_tools-0.10.20-cp310-cp310-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.20-cp310-cp310-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 4d3e2cfaf74f1369b277251e8acb45cc4c5c65143c3042416a347320291970bc
MD5 2c7b9ef23b3bef4139b46f046946cf7e
BLAKE2b-256 79523a0ead640ca829e01114c31cf61d7af0ee77f9d39364e985efbacb56e0c8

See more details on using hashes here.

File details

Details for the file sapphyre_tools-0.10.20-cp39-cp39-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.20-cp39-cp39-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 3d9b943de21d7d8882367412f50c9a2f2da8d1b751edf961bf088b990912b642
MD5 1865321b263ca270edaf56f44e9fc068
BLAKE2b-256 8303ff66fb2cf4fdf5399e3c0b74a84683d9814b1a0f0e44e0f3c96513f1d8d7

See more details on using hashes here.

File details

Details for the file sapphyre_tools-0.10.20-cp38-cp38-manylinux_2_28_x86_64.whl.

File metadata

File hashes

Hashes for sapphyre_tools-0.10.20-cp38-cp38-manylinux_2_28_x86_64.whl
Algorithm Hash digest
SHA256 3098945b7cd102148870bc6f2c639dd7dc22d95382af14b91b02ec0bbb3a154d
MD5 ae95dc9beeeaa3baaea53246096e78b2
BLAKE2b-256 b600925c019a351c7b52a25f6fb658b71ba9b54c9ff93cad83fcef337235c142

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page