SEISMIC-RNA
Structure Ensemble Inference by Sequencing, Mutation Identification, and Clustering of RNA
About
SEISMIC-RNA analyzes data from RNA mutational profiling experiments, such as DMS-MaPseq and SHAPE-MaP. This software introduces an optimized implementation of the algorithm DREEM for detecting and quantifying RNA structure ensembles.
Documentation
Documentation for installing and using SEISMIC-RNA is available on GitHub Pages.
Issues
The issue page of the GitHub repository is the official location for reporting bugs and other issues. Before opening a new issue, please check if a similar issue already exists.
Contributors
SEISMIC-RNA has been developed by the following individuals in the lab of Silvi Rouskin at Harvard Medical School:
2 maintainers
Metadata
2 maintainers
Release files for seismic-rna 0.26.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| seismic_rna-0.26.0.tar.gz | 51.1 MB | With provenance | Details for seismic_rna-0.26.0.tar.gz |
Built distributions (wheels)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| seismic_rna-0.26.0-cp313-cp313-musllinux_1_2_x86_64.whl | CPython 3.13 | CPython 3.13 | Linux musl 1.2+ x86-64 | Details for seismic_rna-0.26.0-cp313-cp313-musllinux_1_2_x86_64.whl |
| seismic_rna-0.26.0-cp313-cp313-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl | CPython 3.13 | CPython 3.13 | Linux glibc 2.17+ x86-64, Linux glibc 2.28+ x86-64 | Details for seismic_rna-0.26.0-cp313-cp313-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl |
| seismic_rna-0.26.0-cp313-cp313-macosx_11_0_arm64.whl | CPython 3.13 | CPython 3.13 | macOS 11.0+ ARM64 | Details for seismic_rna-0.26.0-cp313-cp313-macosx_11_0_arm64.whl |
Total release size: 53.7 MB
Release files / seismic_rna-0.26.0.tar.gz
| Download URL | seismic_rna-0.26.0.tar.gz |
|---|---|
| Size | 51.1 MB |
| Tags | Source |
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Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
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Transparency logRelease files / seismic_rna-0.26.0-cp313-cp313-musllinux_1_2_x86_64.whl
| Download URL | seismic_rna-0.26.0-cp313-cp313-musllinux_1_2_x86_64.whl |
|---|---|
| Size | 860.0 kB |
| Tags | CPython 3.13 Linux musl 1.2+ x86-64 |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
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Transparency logRelease files / seismic_rna-0.26.0-cp313-cp313-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl
| Download URL | seismic_rna-0.26.0-cp313-cp313-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl |
|---|---|
| Size | 859.7 kB |
| Tags | CPython 3.13 Linux glibc 2.17+ x86-64 Linux glibc 2.28+ x86-64 |
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SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
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Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
|
Provenance
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Transparency logRelease files / seismic_rna-0.26.0-cp313-cp313-macosx_11_0_arm64.whl
| Download URL | seismic_rna-0.26.0-cp313-cp313-macosx_11_0_arm64.whl |
|---|---|
| Size | 857.8 kB |
| Tags | CPython 3.13 macOS 11.0+ ARM64 |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
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PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
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Transparency logSecurity for seismic-rna 0.26.0
Provenance
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Full provenance
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Attestation for seismic_rna-0.26.0.tar.gz
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Aug 27, 2026.
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