9 projects
defense-predictor
Python module for running Defense Predictor, a machine learning model to predict antiphage defense systems
rs3
Predict the activity of CRISPR sgRNAs
anchors
Python package for calculating scores from ancnchor or modifier screens
poola
Python package to analyze the results of pooled CRISPR screens
sglearn
Python package for featurizing sgRNAs for machine learning
sgrna-designer
Python library to design sgRNA oligos
gnt
Python packcage for caidentifying Genetic iNTeractions from combinatorial screening data.
stringdb
Python functions to access the STRING API, a source of protein-protein association networks.
gpplot
Plotting functions for the Genetic Perturbation Platform's R&D group at the Broad institute.
