Skip to main content

bioinformatics modules.

Project description

biomodules: 生物信息模块

通用模块

  1. MergeDir,给定一个输入文件夹和一个输出文件,把该文件夹下的所有文件合并到该文件中;

序列相关(seq)

  1. Fastq2Fasta,fastq转fasta;

预处理模块(preprocessing)

  1. Fastqc,使用fastqc进行质量控制;
  2. Filtlong,使用Filtlong过滤reads;

序列比对(align)

  1. blastn,使用blastn进行序列比对;
  2. minimap2,使用minimap2进行序列比对;

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

biomodules-1.1.1.tar.gz (5.5 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

biomodules-1.1.1-py2.py3-none-any.whl (6.0 kB view details)

Uploaded Python 2Python 3

File details

Details for the file biomodules-1.1.1.tar.gz.

File metadata

  • Download URL: biomodules-1.1.1.tar.gz
  • Upload date:
  • Size: 5.5 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/4.0.2 CPython/3.11.2

File hashes

Hashes for biomodules-1.1.1.tar.gz
Algorithm Hash digest
SHA256 9d3fc988f763fc41593443eb52b8ef8fed4f27d66b9a90bf6f59e82c9c8bd294
MD5 a847ce18ed4a997a37244e8fd8ba004a
BLAKE2b-256 1e223267071c1fab7fdfaf1b876efd7ced23d79a82ced3f1f97d9b42e190a33a

See more details on using hashes here.

File details

Details for the file biomodules-1.1.1-py2.py3-none-any.whl.

File metadata

  • Download URL: biomodules-1.1.1-py2.py3-none-any.whl
  • Upload date:
  • Size: 6.0 kB
  • Tags: Python 2, Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/4.0.2 CPython/3.11.2

File hashes

Hashes for biomodules-1.1.1-py2.py3-none-any.whl
Algorithm Hash digest
SHA256 5b938351619aae8194a0ca46d8503841f18d5a906a25c261fd59b3c071cf87d7
MD5 8653998a7aa359da8c324bf183ff3f6f
BLAKE2b-256 de25d3c4a3050a648c30ee3d55a236b4e7af4dcd59002f962624a08f82d55dcc

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page