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convert between bioinformatics formats

Project description

Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another. Documentation Status
contributions:Want to add a convertor ? Please join
issues:Please use


In order to install bioconvert, you can use pip:

pip install bioconvert

We also provide releases on bioconda (

conda install bioconvert

and Singularity container are available. See for details.


bioconvert fastq2fasta input.fastq output.fasta
bioconvert gz2dsrc input.fq.gz output.dsrc2
bioconvert bam2bed input.bam output.bed
bioconvert --help

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Files for bioconvert, version 0.4.3
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