pysam — a Python package for reading, manipulating, and writing genomic data sets.
pysam is a lightweight wrapper of the HTSlib API and provides facilities to read and write SAM/BAM/CRAM/VCF/BCF/BED/GFF/GTF/FASTA/FASTQ files as well as access to the command-line functionality of samtools and bcftools. The module supports compression and random access through indexing.
This module provides a low-level wrapper around HTSlib’s C API using Cython and a high-level API for convenient access to the data within standard genomic file formats.
Release files for pysam 0.22.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| pysam-0.22.0.tar.gz | 4.6 MB | Details |
Built distributions (wheels)
Total release size: 428.4 MB
Release files / pysam-0.22.0.tar.gz
| Download URL | pysam-0.22.0.tar.gz |
|---|---|
| Size | 4.6 MB |
| Tags | Source |
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Release files / pysam-0.22.0-cp312-cp312-manylinux_2_28_x86_64.whl
| Download URL | pysam-0.22.0-cp312-cp312-manylinux_2_28_x86_64.whl |
|---|---|
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| Tags | CPython 3.12 Linux glibc 2.28+ x86-64 |
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Release files / pysam-0.22.0-cp312-cp312-manylinux_2_28_aarch64.whl
| Download URL | pysam-0.22.0-cp312-cp312-manylinux_2_28_aarch64.whl |
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Release files / pysam-0.22.0-cp312-cp312-macosx_11_0_arm64.whl
| Download URL | pysam-0.22.0-cp312-cp312-macosx_11_0_arm64.whl |
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Release files / pysam-0.22.0-cp312-cp312-macosx_10_9_x86_64.whl
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| Download URL | pysam-0.22.0-cp310-cp310-macosx_10_9_x86_64.whl |
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Release files / pysam-0.22.0-cp39-cp39-manylinux_2_28_x86_64.whl
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