Skip to main content

Downloads data and metadata from GEO and SRA and creates standard PEPs.

Project description

Build Status PEP compatible

geofetch is a command-line tool that downloads sequencing data and metadata from GEO and SRA and creates standard PEPs. geofetch is hosted at pypi and documentation is hosted at geofetch.databio.org (source in the /docs folder).

You can convert the result of geofetch into bam files with the sra_convert pipeline.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for geofetch, version 0.6.0
Filename, size & hash File type Python version Upload date
geofetch-0.6.0.tar.gz (21.5 kB) View hashes Source None

Supported by

Elastic Elastic Search Pingdom Pingdom Monitoring Google Google BigQuery Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN SignalFx SignalFx Supporter DigiCert DigiCert EV certificate StatusPage StatusPage Status page