Skip to main content

Build Status PEP compatible

geofetch is a command-line tool that downloads sequencing data and metadata from GEO and SRA and creates standard PEPs. Documentation is hosted at code.databio.org/geofetch (source in the /docs folder).

You can convert the result of geofetch into bam files with the sra_convert pipeline.

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

geofetch-0.3.tar.gz (18.3 kB view details)

Uploaded Source

File details

Details for the file geofetch-0.3.tar.gz.

File metadata

  • Download URL: geofetch-0.3.tar.gz
  • Upload date:
  • Size: 18.3 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.9.1 pkginfo/1.4.1 requests/2.9.1 setuptools/34.2.0 requests-toolbelt/0.8.0 tqdm/4.19.5 CPython/2.7.12

File hashes

Hashes for geofetch-0.3.tar.gz
Algorithm Hash digest
SHA256 4a0786d475c804811e6cf18da4e0b9bf62ed6eaf80ce6716288a65e60b1f2eae
MD5 13b499fb061e8ce60e743b50c1fbf980
BLAKE2b-256 03dfac8aa9b6a40928dab02bc74c395f74deadcfeba0f4cceeeb1cbfdc91fc96

See more details on using hashes here.

Release history Release notifications | RSS feed

0.12.11

2 files

0.12.10

2 files

0.12.9

2 files

0.12.8

2 files

0.12.7

2 files

0.12.6

2 files

0.12.5

2 files

0.12.4

2 files

0.12.3

2 files

0.12.2

2 files

0.12.1

2 files

0.12.0

2 files

0.11.2

2 files

0.11.1

2 files

0.11.0

2 files

0.10.1

2 files

0.10.0

2 files

0.9.0

2 files

0.8.0

2 files

0.7.0

1 file

0.6.0

1 file

0.5.0

1 file

0.4

1 file

This release

0.3 This release

1 file

0.2

1 file

0.1

1 file

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page