Skip to main content

gsetl

Project description

gseda how to pack: https://cloud.tencent.com/developer/article/2401343

bam_filter

  • drop_multiple_mapping_reads: drop multiple mapping reads from aligned bam

bam_surgery

  • insert_cs_to_sbr_bam: insert consensus reads to subreads.bam
  • insert_ref_to_sbr_bam: insert aligned ref seqeunce region to sbreads.bam

fact_table_nan

  • used to analysis the fact tables that gsetl generated

msa_view

  • show pileup msa alignment result

Project details


Release history Release notifications | RSS feed

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

gseda-0.0.20.tar.gz (24.5 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

gseda-0.0.20-py3-none-any.whl (45.0 kB view details)

Uploaded Python 3

File details

Details for the file gseda-0.0.20.tar.gz.

File metadata

  • Download URL: gseda-0.0.20.tar.gz
  • Upload date:
  • Size: 24.5 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.0.1 CPython/3.8.19

File hashes

Hashes for gseda-0.0.20.tar.gz
Algorithm Hash digest
SHA256 8e56d86648677a971443ddfd9fa61577f903a3ab08b3a87db1aea1633026ed57
MD5 dd5c5bab42e4aad7e68423f05a26c7bc
BLAKE2b-256 5041168b0769ebc1cf922ecbbb0dc06a6334b1d20a65a746f82d19b0c906a329

See more details on using hashes here.

File details

Details for the file gseda-0.0.20-py3-none-any.whl.

File metadata

  • Download URL: gseda-0.0.20-py3-none-any.whl
  • Upload date:
  • Size: 45.0 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.0.1 CPython/3.8.19

File hashes

Hashes for gseda-0.0.20-py3-none-any.whl
Algorithm Hash digest
SHA256 7ade034e4cda8a99602d7427e2e2fd6908497578f6a1a4e38aed33eb2e5507dc
MD5 f2d6d19626b09f9a7c1d403b65adca2c
BLAKE2b-256 5910f003eb56a51ed4aba107341640df29e3c2107026d87d527d3bbec4cb1e75

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page