gsetl
Project description
gseda how to pack: https://cloud.tencent.com/developer/article/2401343
bam_filter
- drop_multiple_mapping_reads: drop multiple mapping reads from aligned bam
bam_surgery
- insert_cs_to_sbr_bam: insert consensus reads to subreads.bam
- insert_ref_to_sbr_bam: insert aligned ref seqeunce region to sbreads.bam
fact_table_nan
- used to analysis the fact tables that gsetl generated
msa_view
- show pileup msa alignment result
ChangeLog
0.0.26
-
- phreq-ana-cli
0.0.25
-
- longIndel analysis
0.0.23
-
- mm2 version check
0.0.21
-
- bam-basic-stat-cli
-
- msa-view-cli
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
gseda-1.12.0.tar.gz
(45.6 kB
view details)
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
gseda-1.12.0-py3-none-any.whl
(83.0 kB
view details)
File details
Details for the file gseda-1.12.0.tar.gz.
File metadata
- Download URL: gseda-1.12.0.tar.gz
- Upload date:
- Size: 45.6 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.1.0 CPython/3.8.20
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
dc325263bb678bc08503fac2db086b4bfb538c69405688242e4e41c068a9e145
|
|
| MD5 |
f1841c737f2000bb319570f713381c8e
|
|
| BLAKE2b-256 |
a64757a1737948fceb8480ee692d8fb723aada71fbfd51fa2265679ab8c1d19e
|
File details
Details for the file gseda-1.12.0-py3-none-any.whl.
File metadata
- Download URL: gseda-1.12.0-py3-none-any.whl
- Upload date:
- Size: 83.0 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.1.0 CPython/3.8.20
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
0015ac5e8ba1b3c182363f79136f2c1b6afbe974962d3029fc8ae55e21b379db
|
|
| MD5 |
243dd5a0e698db6a2255a64d6536acdc
|
|
| BLAKE2b-256 |
cecfcbf560048dfc24bb500f3385bbdfc196ccab34a86cfc67476bb1f1d6f935
|