gsetl
Project description
gseda how to pack: https://cloud.tencent.com/developer/article/2401343
bam_filter
- drop_multiple_mapping_reads: drop multiple mapping reads from aligned bam
bam_surgery
- insert_cs_to_sbr_bam: insert consensus reads to subreads.bam
- insert_ref_to_sbr_bam: insert aligned ref seqeunce region to sbreads.bam
fact_table_nan
- used to analysis the fact tables that gsetl generated
msa_view
- show pileup msa alignment result
ChangeLog
0.0.26
-
- phreq-ana-cli
0.0.25
-
- longIndel analysis
0.0.23
-
- mm2 version check
0.0.21
-
- bam-basic-stat-cli
-
- msa-view-cli
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
gseda-0.4.0.tar.gz
(31.1 kB
view details)
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
gseda-0.4.0-py3-none-any.whl
(54.0 kB
view details)
File details
Details for the file gseda-0.4.0.tar.gz.
File metadata
- Download URL: gseda-0.4.0.tar.gz
- Upload date:
- Size: 31.1 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.8.19
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
1279f39021ad9f258921d1f80fdb7a947384f24fbfe9201ff09d55d82db5e815
|
|
| MD5 |
bb2bcacda7898ce0ee1269e9a86c4d1f
|
|
| BLAKE2b-256 |
91020d29887b9d7ffe6e0fe7b4a17bd51251f4b95f235210208134f0f43ddbf0
|
File details
Details for the file gseda-0.4.0-py3-none-any.whl.
File metadata
- Download URL: gseda-0.4.0-py3-none-any.whl
- Upload date:
- Size: 54.0 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.8.19
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
88c460bb5c9b7670692d72d6f5a15f8c092660f45b61006d410dd412dc543d4f
|
|
| MD5 |
42672c91115827207a35f0511b62b798
|
|
| BLAKE2b-256 |
37be91aeec3b7fe33baf0238bbfc21c96daccd8476dba3775597070f19ef474a
|