gsetl
Project description
gseda how to pack: https://cloud.tencent.com/developer/article/2401343
bam_filter
- drop_multiple_mapping_reads: drop multiple mapping reads from aligned bam
bam_surgery
- insert_cs_to_sbr_bam: insert consensus reads to subreads.bam
- insert_ref_to_sbr_bam: insert aligned ref seqeunce region to sbreads.bam
fact_table_nan
- used to analysis the fact tables that gsetl generated
msa_view
- show pileup msa alignment result
ChangeLog
0.0.26
-
- phreq-ana-cli
0.0.25
-
- longIndel analysis
0.0.23
-
- mm2 version check
0.0.21
-
- bam-basic-stat-cli
-
- msa-view-cli
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
gseda-1.3.0.tar.gz
(38.3 kB
view details)
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
gseda-1.3.0-py3-none-any.whl
(66.0 kB
view details)
File details
Details for the file gseda-1.3.0.tar.gz.
File metadata
- Download URL: gseda-1.3.0.tar.gz
- Upload date:
- Size: 38.3 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.8.19
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
1212b1af03144dce88bdad4c67859fed77c690e6ea426a48e0422c5c75dd43d5
|
|
| MD5 |
660610c118098631269bfbc17364d53a
|
|
| BLAKE2b-256 |
fe96a4842a29819d6e1dcf883b11e2c7853c5896a42c49f3cdabbf2626236ef1
|
File details
Details for the file gseda-1.3.0-py3-none-any.whl.
File metadata
- Download URL: gseda-1.3.0-py3-none-any.whl
- Upload date:
- Size: 66.0 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.8.19
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
4286fdc09c703f0f418fe522ce31e7b825e44d7ab2eecf5af4ebfe18bbafeea7
|
|
| MD5 |
1b40b97c50fcd24d61eefe74800b8e62
|
|
| BLAKE2b-256 |
f07a54aec894fae59a16f894da02743a05ef06ec5713ccc3c88703f607d0f7db
|