gsetl
Project description
gseda how to pack: https://cloud.tencent.com/developer/article/2401343
bam_filter
- drop_multiple_mapping_reads: drop multiple mapping reads from aligned bam
bam_surgery
- insert_cs_to_sbr_bam: insert consensus reads to subreads.bam
- insert_ref_to_sbr_bam: insert aligned ref seqeunce region to sbreads.bam
fact_table_nan
- used to analysis the fact tables that gsetl generated
msa_view
- show pileup msa alignment result
ChangeLog
0.0.23
-
- mm2 version check
0.0.21
-
- bam-basic-stat-cli
-
- msa-view-cli
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
gseda-0.0.24.tar.gz
(25.0 kB
view details)
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
gseda-0.0.24-py3-none-any.whl
(45.4 kB
view details)
File details
Details for the file gseda-0.0.24.tar.gz.
File metadata
- Download URL: gseda-0.0.24.tar.gz
- Upload date:
- Size: 25.0 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.8.19
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
ae3e26e33e5b7879de12c7578343647011dddba3e66034d1e90416574e636ca0
|
|
| MD5 |
84b9e047dd808c98ab9836feb4807a59
|
|
| BLAKE2b-256 |
d7c90765863a292f9ae389795a2fe6f0ff3eb6354ef18cb075c540f60ca43ec0
|
File details
Details for the file gseda-0.0.24-py3-none-any.whl.
File metadata
- Download URL: gseda-0.0.24-py3-none-any.whl
- Upload date:
- Size: 45.4 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.8.19
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
b8a152bd850aff36c0c14dbb327630836b3179448e6d1fb612bca23a38c85fa6
|
|
| MD5 |
5a642a5d80ebae2359d71ad2235be248
|
|
| BLAKE2b-256 |
8db9c9dd3b1278055a5b4989a3648f2b63c2f0ad971b550b62506244bebef539
|