gsetl
Project description
gseda how to pack: https://cloud.tencent.com/developer/article/2401343
bam_filter
- drop_multiple_mapping_reads: drop multiple mapping reads from aligned bam
bam_surgery
- insert_cs_to_sbr_bam: insert consensus reads to subreads.bam
- insert_ref_to_sbr_bam: insert aligned ref seqeunce region to sbreads.bam
fact_table_nan
- used to analysis the fact tables that gsetl generated
msa_view
- show pileup msa alignment result
ChangeLog
0.0.26
-
- phreq-ana-cli
0.0.25
-
- longIndel analysis
0.0.23
-
- mm2 version check
0.0.21
-
- bam-basic-stat-cli
-
- msa-view-cli
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
gseda-0.4.1.tar.gz
(31.2 kB
view details)
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
gseda-0.4.1-py3-none-any.whl
(54.1 kB
view details)
File details
Details for the file gseda-0.4.1.tar.gz.
File metadata
- Download URL: gseda-0.4.1.tar.gz
- Upload date:
- Size: 31.2 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.8.19
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
925cf482ae4491e6ffa5ed41b952c5c937c4b4e03b621078988be1ee1b3be5b0
|
|
| MD5 |
facc27a13f36567a2db0c7a480ef1bc9
|
|
| BLAKE2b-256 |
3c20bca06356b50f5dc95a77307fffd7efcc852f5fb750d378d6e64512d3a61b
|
File details
Details for the file gseda-0.4.1-py3-none-any.whl.
File metadata
- Download URL: gseda-0.4.1-py3-none-any.whl
- Upload date:
- Size: 54.1 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.0.1 CPython/3.8.19
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
cb57c791600f505f9b29969330edf597462d70d5ea611cd353fa67e7ebe791e1
|
|
| MD5 |
e2ec25d2128d453e96409bad43856a1a
|
|
| BLAKE2b-256 |
1634bb2b9a450340b444c7838efc7b9b406be334ce55b6abc9993f4f5ce7d273
|